Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq233 116 4e-21 >seq233 Length=254456 Score = 116 bits (128), Expect = 4e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || |||||| || |||||| ||||||||| |||||||||||||| ||||| ||| Sbjct 87068 TGCGCCACCATGAGTGTGAGCAGGCCGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCC 87127 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 | || | |||||||||||||||||| || ||||| ||| |||| |||||||||||| Sbjct 87128 ACATCGGCGCTGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCCGCGACGTAGAACTGG 87187 Query 145882 CA 145883 || Sbjct 87188 CA 87189 Score = 96.9 bits (106), Expect = 4e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949 ||||||||||||||| |||||| ||| | | || |||||||| ||||||| || ||| Sbjct 87532 GTGGCAGGGCGGCAGCGCCATGTGTGGCTGTGCAGCGGGGTTCCACGCGGTGATGATGAG 87591 Query 145950 CCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCC 146009 || ||||| ||||||||| |||||||| | || |||| ||||||||||| || Sbjct 87592 CCGCCTGCACTCGGGGTTGCTCTTGATGCGCGAGATGAGGTTTGCCAGCTGGTCCACACC 87651 Query 146010 CTGCCC 146015 ||| || Sbjct 87652 CTGGCC 87657 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||| | ||||||||| ||||| || ||||| ||||| || ||| Sbjct 88189 GTACTCTGCGCCAAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCTCCCTCCTC 88248 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 |||||| | |||||| | | | | ||| | ||| | | |||| |||||||||| | Sbjct 88249 CCTGTGGCTCAGCCCCACGCTGTCAAGGTACGCCCTGCTGCTGTTGCCGTCCCAGATGTG 88308 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 |||||| | | || || |||| | || || |||| |||||||||||||| ||| Sbjct 88309 CACGCCCTTGTCTTGCAGGTCCTTGGCATTGGTTGAACCCCGGATGAACCAGAGCAACTC 88368 Query 146220 TTC 146222 || Sbjct 88369 CTC 88371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590066709686720