Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq78 91.5 1e-13 seq1064 82.4 7e-11 >seq78 Length=354265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||| | || ||||| ||||||||||||||||| || ||||| ||| Sbjct 344587 CAGCACGAGGTGCAGCGTTGACTCCTTTTGAATGTTGTAATCAGCCAAGGTGCGGCCATC 344528 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || ||||||| |||||||| || || || || ||||||||||| Sbjct 344527 CTCCAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 344468 >seq1064 Length=71438 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||| | || ||||| || || ||||||||||| | Sbjct 27952 CCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGCC 27893 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| |||||| ||||| || ||||| |||| || |||||||| || ||||| Sbjct 27892 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 27833 Query 118632 ATGCC 118636 ||||| Sbjct 27832 ATGCC 27828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433823166962656