Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1336 89.7 4e-13 >seq1336 Length=336432 Score = 89.7 bits (98), Expect = 4e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 33580 GGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCA 33638 |||||||||||||| ||| | |||| | ||||||||||| |||||| | ||| || Sbjct 277089 GGCGACAAGTTTGCGTCGCGCCACGGGC-AGAAGGGCACGGTCGGCATCACATACACGCA 277031 Query 33639 GTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGC 33698 | ||||||||||||||| || || ||| | || |||||||| || | ||||| || || Sbjct 277030 GGAGGACATGCCGTTCACCGCTGAGGGCATCGTGCCGGACCTCATCGTGAACCCTCACGC 276971 Query 33699 GTTCCCCTCGCGCATGAC 33716 |||| |||||||| Sbjct 276970 CATCCCAAGCCGCATGAC 276953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356227660695304