Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq233 102 6e-17 >seq233 Length=254456 Score = 102 bits (112), Expect = 6e-17 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 25761 GTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACAC 25820 |||||| || |||||| ||||||||||| || || | | ||||||||| |||||||| Sbjct 88168 GTAGTCGGCGTGCATGTCTGTGTACTCTGCGCCAAAGTGGCGCCACTGGAAGCCGTACAC 88227 Query 25821 CGGTCCTAGGTCTCCATCTTCCCTGT-GCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTG 25878 ||| || |||||||| || ||||||| |||| |||||| | | || | | | ||| Sbjct 88228 CGGCCCGAGGTCTCCCTCCTCCCTGTGGCTC--AGCCCCACGCTGTCAAGGTACGCCCTG 88285 Query 25879 GAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAC 25938 | ||| |||||||||| | || ||||| || || || |||| || || || Sbjct 88286 CTGCTGTTGCCGTCCCAGATGTGCACGCCCTTGTCTTGCAGGTCCTTGGCATTGGTTGAA 88345 Query 25939 CCTCTGACGAACCACAGCAGCTCC 25962 || | || |||||| |||| |||| Sbjct 88346 CCCCGGATGAACCAGAGCAACTCC 88369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340131929055864