Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq723 134 1e-26 seq787 89.7 5e-13 >seq723 Length=331235 Score = 134 bits (148), Expect = 1e-26 Identities = 155/205 (76%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTC 153655 ||||| || ||||| || || || || ||||| || |||| || |||||| ||||||||| Sbjct 247007 GCAATGGATGCCAGGTTGCACACTGCGGTCTCATCAGGCG-CGGTGTACTCCACGATCTC 246949 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| ||||||||||| || ||| ||||| || ||||| ||||| ||||| ||||| Sbjct 246948 CGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCA 246889 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCG---ACGATAAA 153772 ||| ||| |||||||||| || ||||||||||| |||| ||| ||| ||| Sbjct 246888 GCTGTCCTTGTAGAGCATGTAGGGGTTGCCGGTCTCGATCTGCGCCTCGAGCACGGCAAA 246829 Query 153773 CCTATGCAGGTCCTGCGCTCGCACC 153797 || ||| | |||||| |||||| Sbjct 246828 CC---ACAGCTGCTGCGCGCGCACC 246807 >seq787 Length=122967 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 52596 ATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTG 52655 |||||| || ||| |||||||||| ||||| |||||||| | | ||||||| Sbjct 87784 ATCCTGGAGATCATCACCGAGGCGGTGGAGATCGAGCAGGAGTTTGTGTGCGACGCGCTG 87725 Query 52656 CCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCG 52715 || || || || | |||||||||| || |||| || ||||||||||||||||||| Sbjct 87724 CCCGTGGACCTCATCGGCATGAACGGCAAGCTCATGAGCCAGTACATCGAGTTTGTGGCA 87665 Query 52716 GATCGTCTGTTGGTGCAGCTCGGGCA 52741 || || ||| ||| | ||| ||||| Sbjct 87664 GACCGGCTGCTGGCGGCGCT-GGGCA 87640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496253913912960