Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq787 93.3 5e-14 seq723 87.8 2e-12 seq23 84.2 3e-11 seq966 82.4 9e-11 seq887 82.4 9e-11 seq799 82.4 9e-11 seq716 82.4 9e-11 seq433 82.4 9e-11 seq52 82.4 9e-11 >seq787 Length=122967 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||||||||| || |||| || || |||||||| || Sbjct 88065 TGCAGGCCCTCATCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGCCCGGGCATGAGGCCG 88124 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| |||||||| || || || || || ||||||||||||||||| | Sbjct 88125 CGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCTGAGAAGAAGATGCCCTCCACGGCG 88184 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653 ||| | || | || ||||| ||||| Sbjct 88185 GCGTAGGCCACCAGGCGCTCCGCAAA 88210 >seq723 Length=331235 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||||| ||||||||| ||| |||| || || ||||| || || Sbjct 27130 TGCAGGCCCTCATCCCTGCTGATGAGCTCGTTAGAGAAGGTGAGGCCCGGCATAAGGCCC 27189 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| |||||||| || || || || || ||| |||||||||||| ||| Sbjct 27190 CGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGTGGATGCCCTCCACGCAG 27249 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653 || || || | || |||| ||||| Sbjct 27250 GCAAAGGCCAGCAGGCGCTGCGCAAA 27275 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 109705 AGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764 || |||| |||||||||| || || || || ||| || | ||||||||| | Sbjct 248303 AGGTGCTGGTTGACCACGGTGAACTCGCCGCTCAGCACGCGGCGCACGTAGATGTTGCTG 248244 Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824 |||||||| ||||| ||||| |||||||| ||||| || ||| || ||||||||| Sbjct 248243 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTTGCGGTGGGCATG 248184 Query 109825 GGAGCCATGAGAAGACTGTTTCG 109847 || |||| || || ||||| || Sbjct 248183 GGCGCCACCAGCAGGCTGTTGCG 248161 >seq23 Length=225717 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||| Sbjct 135206 TAGCTCAGTCGGTTAGAGCGTGGGTCTTATGAGCCCAAGGTCACGGGTTCGAGCCCCGTA 135147 Query 136777 GGGAACAGCTTTTAGA 136792 ||| || | ||| || Sbjct 135146 TGGAGCACCATTTTGA 135131 >seq966 Length=196181 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 11456 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCCGTTCGAGCC 11402 >seq887 Length=59509 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 36967 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCCGTTCGAGCC 36913 >seq799 Length=140376 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 246 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCCGTTCGAGCC 300 >seq716 Length=17376 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 880 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCCGTTCGAGCC 934 >seq433 Length=38799 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 256 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCAGTTCGAGCC 310 >seq52 Length=499512 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 19527 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCCGTTCGAGCC 19581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588965928510400