Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq21 369 4e-97 >seq21 Length=95773 Score = 369 bits (408), Expect = 4e-97 Identities = 363/469 (77%), Gaps = 0/469 (0%) Strand=Plus/Plus Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 |||| |||||||| ||||| || || ||||||||||| ||||||||| | || ||||| | Sbjct 17372 TCGTTTTCCAAGCTGAACATAACATTCTTATGCACCCTTTCCACATGTTAGGTGTAGCTG 17431 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| || ||||| || | ||||||||||||||||||||||| || || || || ||| Sbjct 17432 GTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGTTCATTAGTTACTTCATCTTTAA 17491 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 |||||||||| ||||| | || ||| ||| | || ||||| ||||| |||||||||| Sbjct 17492 TCCGTGAAACAACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAG 17551 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 ||||||| ||||| || || || || || ||||| |||||| | |||||||| || || | Sbjct 17552 AAACTTACAACATCGTAGCCGCACACGGTTACTTTGGTCGTTTAATCTTCCAATACGCTT 17611 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 | ||||||||||| | | ||||||||| | ||||| ||||| || || | || | Sbjct 17612 CTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTAGGTATTT 17671 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || |||||| | ||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct 17672 GGTTCACTGCTTTAGGTATTTCAACTATGGCTTTCAACCTTAACGGTTTCAACTTCAACC 17731 Query 155831 AGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCG 155890 | || || || || | ||| || | |||||||| ||||| | ||||| | Sbjct 17732 AATCAGTTGTTGATTCACAAGGTCGTGTTTTAAACACATGGGCTGACATCATCAACCGTG 17791 Query 155891 CTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCC 155939 || | ||||||||||| |||||||| |||||||||||||||||||| Sbjct 17792 CTAACTTAGGTATGGAAGTTATGCACGAACGTAACGCTCACAACTTCCC 17840 Score = 174 bits (192), Expect = 2e-38 Identities = 174/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 |||| ||||| | |||||| |||| ||||| | || |||||||||| ||||| | | Sbjct 13084 TCTGTGAGTGGATCACTTCTACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGATCA 13143 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | ||||| || || ||||| |||| ||||| ||||| |||| Sbjct 13144 TGATCCCTACATTATTAACTGCTACTTCAGTATTCATCATCGCTTTCATCGCTGCTCCTC 13203 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| || |||||||| ||||| || || ||||||| ||| | || || ||||||| Sbjct 13204 CAGTAGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACAACA 13263 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCA 155195 |||||||||||||||| || |||| ||||||||| || ||||| || Sbjct 13264 TCATCTCTGGTGCTGTAGTTCCTACTTCAAACGCTATCGGTCTGCA 13309 Score = 109 bits (120), Expect = 6e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 155335 ATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTC 155394 |||||||||||||| ||| || |||||||||||||| | ||||| ||||||||| Sbjct 16127 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCACCAGTTGCAGCTGCTACTGCTGTATTC 16186 Query 155395 CTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGT 155454 | | || ||| |||| ||||||||||||||||| | |||||| | ||||| || || Sbjct 16187 ATCATCTACCCTATCGGACAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTATTTCAGGA 16246 Query 155455 ACTTTTAACT 155464 ||||| |||| Sbjct 16247 ACTTTCAACT 16256 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 155197 TTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTC 155256 ||||| || ||||||||||| || || | ||||||||||| ||||| |||||||||| | Sbjct 14674 TTCTACCCAATTTGGGAAGCTGCTTCTTTAGATGAGTGGTTATACAACGGTGGTCCTTAC 14733 Query 155257 CAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAA 155316 ||| | | || | |||||| | | || ||| ||| |||||| |||||||| Sbjct 14734 CAATTAATCGTTTGTCACTTCTTCTTAGGTATCTGCTGTTACATGGGTCGTGAGTGGGAA 14793 Query 155317 CTTTCTTACCGTCTTGGCATGC 155338 | ||||||||| | || |||| Sbjct 14794 TTATCTTACCGTTTAGGTATGC 14815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584825199318080