Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq21 526 2e-144 >seq21 Length=95773 Score = 526 bits (582), Expect = 2e-144 Identities = 726/1011 (72%), Gaps = 10/1011 (1%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | ||| || || || ||||| || ||||| || || || ||| || Sbjct 40277 GATGACTGGTTACGTCAAGACCGTTTCGTATTTGTAGGTTGGTCAGGTCTTCTTCTTTTT 40336 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||| || | || | || |||||| ||||||| ||| ||||||| || ||| Sbjct 40337 CCTTGTGCATACTTTGCACTAGGAGGTTGGTTTACTGGTACAACTTTTGTAACATCATGG 40396 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || || || || | |||| ||| || | || ||| |||||| | || || || || Sbjct 40397 TATACACATGGGTTAGCTACTTCTTACTTAGAAGGTTGTAACTTCTTAACTGCTGCAGTT 40456 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTT-TGGGGTCCTGAGTCTCA 159544 || || ||||| || ||||| || || || || | ||| |||||||| || |||| Sbjct 40457 TCAACACCTGCAAACAGTATGGCACACTCA-TTATTATTCTTATGGGGTCCAGAAGCTCA 40515 Query 159545 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGG 159604 || |||| || ||||| ||| | || || ||||||| ||||| || | || || Sbjct 40516 AGGTGATTTTACTCGTTGGTGTCAATTAGGTGGTTTATGGACATTTGTTGCTTTACATGG 40575 Query 159605 TGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACGTCTCATTGGTA- 159663 | | || | ||||||| |||||| | ||||| |||||| | |||||| ||| ||| Sbjct 40576 TTCTTTTGGTTTAATTGGATTCATGTTACGTCAATTTGAAATTGCACGT-TCA---GTAA 40631 Query 159664 ---TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCT 159720 | |||||||||||||||||||| || || | |||||||||||||||||| || | Sbjct 40632 ACTTACGTCCTTACAATGCTATTGCTTTTTCAGCTCCTATTGCTGTTTTTGTTTCAGTAT 40691 Query 159721 TCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAG 159780 || | || |||||||| || || || ||||||| || || || ||||| || || | Sbjct 40692 TCTTAATTTACCCATTAGGACAATCAGGTTGGTTCTTTGCACCTAGTTTTGGTGTTGCTG 40751 Query 159781 CAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCC 159840 | ||||| | || | |||||| | ||||| ||||| |||||||| ||||| || |||| Sbjct 40752 CTATCTTCCGTTTTATTTTGTTCTTCCAAGGTTTTCATAACTGGACATTAAACCCATTCC 40811 Query 159841 ATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTA 159900 |||||||||| ||||||||| | |||||| || || | |||| || || || | || Sbjct 40812 ATATGATGGGTGTTGCTGGTGTTTTAGGTGCTGCTTTATTATGTGCTATTCACGGTGCTA 40871 Query 159901 CTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATT 159960 |||| || |||||| | | ||||||||| || ||||| || || || ||| | Sbjct 40872 CTGTTGAAAACACATTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCATTTAACC 40931 Query 159961 CAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCT 160020 ||||||||| || || |||||||||||||| ||||| ||||| |||||||| || || | Sbjct 40932 CAACTCAAGCTGAAGAAACTTACTCTATGGTAACTGCGAACCGTTTCTGGTCACAAATTT 40991 Query 160021 TCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTA 160080 | ||| |||| || || ||||| || |||||||| ||||| ||||| || || || || | Sbjct 40992 TTGGTGTTGCTTTCTCAAACAAACGTTGGCTTCACTTCTTTATGTTATTAGTTCCGGTAA 41051 Query 160081 TGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACG 160140 || || |||| || | ||||| || |||| | ||||| || | |||||||| | Sbjct 41052 CAGGACTATGGATGTCTGCGATTGGTGTTGTTGGTTTAGCTCTAAACTTACGTGCTTATG 41111 Query 160141 ATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCA 160200 | |||||| ||||| || | || || ||||| ||||| || || || ||||| || | Sbjct 41112 ACTTCGTATCACAAGAAATTCGTGCTGCTGAAGACCCAGAGTTCGAAACTTTCTATACTA 41171 Query 160201 AAAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATG 160260 |||| || |||| || ||||| | ||||| ||| |||| || || ||||| || | Sbjct 41172 AAAATATTTTATTAAATGAAGGTATTCGTGCTTGGATGGCTGCTCAAGACCAACCACACG 41231 Query 160261 AAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 || || | ||||| ||||||||||| ||| | || ||||| || |||| Sbjct 41232 AACGTTTAGTATTCCCTGAAGAAGTATTACCTCGTGGTAACGCTCTATAAT 41282 Score = 405 bits (448), Expect = 6e-108 Identities = 374/474 (79%), Gaps = 0/474 (0%) Strand=Plus/Plus Query 158084 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158143 || |||||||| ||||| ||||| ||||||||||| ||||| ||| | ||||| ||||| Sbjct 17374 GTTTTCCAAGCTGAACATAACATTCTTATGCACCCTTTCCACATGTTAGGTGTAGCTGGT 17433 Query 158144 GTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTT 158203 ||||| ||||| || | ||||||||||||||||| | |||||||| || | | Sbjct 17434 GTATTTGGTGGTTCATTATTCTCTGCTATGCACGGTTCATTAGTTACTTCATCTTTAATC 17493 Query 158204 CGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAG 158263 |||||||| ||||||| || || ||| | || ||||| ||||||||||| ||||| Sbjct 17494 CGTGAAACAACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 17553 Query 158264 ACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 158323 || || |||||||| || ||||| || ||||| |||||||| ||||||||||||||||| Sbjct 17554 ACTTACAACATCGTAGCCGCACACGGTTACTTTGGTCGTTTAATCTTCCAATACGCTTCT 17613 Query 158324 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 158383 ||||||||||| ||||| || ||||||||| | ||||| ||||| ||||| || || ||| Sbjct 17614 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTAGGTATTTGG 17673 Query 158384 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 158443 ||||| || | || | || || ||||| |||||||| |||||||||||||||||||| Sbjct 17674 TTCACTGCTTTAGGTATTTCAACTATGGCTTTCAACCTTAACGGTTTCAACTTCAACCAA 17733 Query 158444 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCT 158503 || | ||||| || |||||||| || ||||| ||||| || | | ||||| ||| Sbjct 17734 TCAGTTGTTGATTCACAAGGTCGTGTTTTAAACACATGGGCTGACATCATCAACCGTGCT 17793 Query 158504 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAC 158557 | ||||||||||||||||| || |||||||| |||||||||||| | ||| Sbjct 17794 AACTTAGGTATGGAAGTTATGCACGAACGTAACGCTCACAACTTCCCATTAGAC 17847 Score = 150 bits (166), Expect = 2e-31 Identities = 177/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 157571 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 157630 |||| | |||||| |||||| | |||||||| | ||||| | || |||||||||| Sbjct 13074 TGGGCACGTTTCTGTGAGTGGATCACTTCTACTGAAAACCGTTTATACATCGGTTGGTTT 13133 Query 157631 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGT 157689 || || | ||||| || || | || | || || || || |||||| |||| ||| | Sbjct 13134 GGTGTGATCATGATCCCTACATTATTAACTGCTACT-TCAGTATTCATCATCGCTTTCAT 13192 Query 157690 CGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 157749 ||||||||| || || || ||||| || |||||||| || || |||||||| | | || Sbjct 13193 CGCTGCTCCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCATTATTATA 13252 Query 157750 TGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCA 157806 || |||||||||||||||||||| || || || |||| ||||| || ||||| || Sbjct 13253 CGGAAACAACATCATCTCTGGTGCTGTAGTTCCTACTTCAAACGCTATCGGTCTGCA 13309 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 157808 TTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTC 157867 ||||| || || |||||||| || || | ||||||||| | || ||||||||||||| | Sbjct 14674 TTCTACCCAATTTGGGAAGCTGCTTCTTTAGATGAGTGGTTATACAACGGTGGTCCTTAC 14733 Query 157868 CAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAA 157927 ||| | | || | ||||||| || | ||||||| |||||||| |||||||||||| Sbjct 14734 CAATTAATCGTTTGTCACTTCTTCTTAGGTATCTGCTGTTACATGGGTCGTGAGTGGGAA 14793 Query 157928 CTTTCATACCGTTTAGGTATGC 157949 | || |||||||||||||||| Sbjct 14794 TTATCTTACCGTTTAGGTATGC 14815 Score = 118 bits (130), Expect = 1e-21 Identities = 112/142 (79%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 157939 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 157998 ||||| ||||| || ||||| |||||| || ||||| ||||| || || || |||| Sbjct 16122 TTTAG--ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCACCAGTTGCAGCTGCTACTGC 16179 Query 157999 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158058 ||||||| || |||| ||| |||| |||||||||||||| || | ||||||| | ||||| Sbjct 16180 TGTATTCATCATCTACCCTATCGGACAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTAT 16239 Query 158059 CTCTGGTACTTTTAACTACATG 158080 || || ||||| |||| |||| Sbjct 16240 TTCAGGAACTTTCAACTTCATG 16261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548365022797760