Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq78 87.8 1e-12 >seq78 Length=354265 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||| | || ||||| || || ||||||||||| ||||| || | |||||| | Sbjct 344589 CGCAGCACGAGGTGCAGCGTTGACTCCTTTTGAATGTTGTAATCAGCCAAGGTGCGGCCA 344530 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| ||| | || | | ||||| || || ||||||||||| ||| Sbjct 344529 TCCTCCAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTG 344470 Query 29692 TCTTGTAA 29699 || || || Sbjct 344469 TCCTGCAA 344462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385212777432888