Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq723 122 8e-23 >seq723 Length=331235 Score = 122 bits (134), Expect = 8e-23 Identities = 171/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTC 147518 || || || ||||| ||||| || || ||||| || |||| || |||||| |||||| || Sbjct 247007 GCAATGGATGCCAGGTTGCACACTGCGGTCTCATCAGGCG-CGGTGTACTCCACGATCTC 246949 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||||||||||||||| || ||| |||| || ||||| ||||| || || ||||| Sbjct 246948 CGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCA 246889 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC---AACGATAAA 147635 ||| ||| |||||||||| || ||||||||||| |||| || ||| ||| Sbjct 246888 GCTGTCCTTGTAGAGCATGTAGGGGTTGCCGGTCTCGATCTGCGCCTCGAGCACGGCAAA 246829 Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACC 147691 || ||| | |||||| |||||| || || |||||||| | || |||| Sbjct 246828 CC---ACAGCTGCTGCGCGCGCACCACCTTGCGGGCACGGCCCTCCTCCTCATACC 246776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 ||||||| || | |||| | ||| ||| |||||||||| |||||| | | |||| | Sbjct 246086 CCTGGTCCACGTAGCGCGCGGTGTCGTTGAACACGCGCAGCATGGGCACAATGCCGTTGC 246027 Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 |||||||||||| ||| | |||||| ||| || | | ||| | | | | || Sbjct 246026 TGGTGCCGTTGGTGCCGCGGATGTAGCTGCCCGTGGCGCGGATGTTGTGGATGCTGATGC 245967 Query 148061 CAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGT-GTAGATGCCG 148119 | || || ||| | |||| ||| ||||||| || | | | || ||||||||| Sbjct 245966 CGATACCTCCGGCAGACTTGCTGATGACAGCGCACTC-CTTGAGGGAGTCGTAGATGCCC 245908 Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACA 148154 |||||||||||||| ||| || ||||| || || Sbjct 245907 TCGATGCTGTCGTTCTTGCTGCACAGCAAGAAGCA 245873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603049948480