Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq723 87.8 2e-12 >seq723 Length=331235 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 122655 CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAG 122714 ||| ||||| || ||| || |||||||| | | || || || || |||||| || Sbjct 27114 CACCGCAAAGTCAGTGTGCAGGCCCTCATCCCTGCTGATGAGCTCGTTAGAGAAGGTGAG 27173 Query 122715 ACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 122774 || ||||| || ||||||||||| | ||| | || |||||||| ||||||||| Sbjct 27174 GCCCGGCATAAGGCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGTG 27233 Query 122775 GATACCCTCCACACACGCAAACGCAAAAAGGCG 122807 ||| |||||||| || ||||| || | ||||| Sbjct 27234 GATGCCCTCCACGCAGGCAAAGGCCAGCAGGCG 27266 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || ||||||| ||||| || || |||||||| | |||||||| | Sbjct 247013 GGCAGCGCAATGGATGCCAGGTTGCACACTGCGGTCTCATCAGGCGCGGTGTACTCCACG 246954 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||| | ||| || || |||| |||| ||||| ||||| | Sbjct 246953 ATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGG 246894 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||||| |||||||||||||||||||| | || ||||| |||| Sbjct 246893 TTGCAGCTGTCCTTGTAGAGCATGTAGGGGTTGCCGGTCTCGATCTG 246847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628021260652800