Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq233 84.2 2e-11 >seq233 Length=254456 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || || | |||| |||||||| |||| || ||||||||||| ||||| || | Sbjct 87065 ACCTGCGCCACCATGAGTGTGAGCAGGCCGTAGCTGGCAATGTTGAAGGGCACGCCCAGG 87124 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||| || | || || || |||||||| |||||||| || | |||||||||||| Sbjct 87125 CCCACATCGGCGCTGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCCGCGACGTAGAAC 87184 Query 6737 TGGCAG 6742 |||||| Sbjct 87185 TGGCAG 87190 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 34603 CTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGA 34662 |||||| |||||||||||| | || |||||||| |||||||| || || || | || Sbjct 87190 CTGCCAGTTCTACGTCGCGGACGGCGAGCTGTCGTGCCAGCTGTACCAGCGCAGCGCCGA 87131 Query 34663 CATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGC 34722 |||| | || ||||| ||||||||||| || |||| |||||||| |||| | || Sbjct 87130 TGTGGGCCTGGGCGTGCCCTTCAACATTGCCAGCTACGGCCTGCTCACACTCATGGTGGC 87071 Query 34723 TCATGT 34728 || || Sbjct 87070 GCAGGT 87065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254734712960