Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq233 118 8e-22 >seq233 Length=254456 Score = 118 bits (130), Expect = 8e-22 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| ||||||||||| || || || | ||| ||||| ||||||||||| || ||||| Sbjct 88180 CATGTCTGTGTACTCTGCGCCAAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTC 88239 Query 27549 TCCCTCTTCCCTGT-GCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCG 27606 |||||| ||||||| |||| |||||| | |||| | | | ||| | |||| || Sbjct 88240 TCCCTCCTCCCTGTGGCTC--AGCCCCACGCTGTCAAGGTACGCCCTGCTGCTGTTGCCG 88297 Query 27607 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAAC 27666 |||||||| | || ||||| || || || |||| || || || || | || |||| Sbjct 88298 TCCCAGATGTGCACGCCCTTGTCTTGCAGGTCCTTGGCATTGGTTGAACCCCGGATGAAC 88357 Query 27667 CACAGCAGCTCCTCCACGACG 27687 || |||| |||||| || ||| Sbjct 88358 CAGAGCAACTCCTCAACCACG 88378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501039391208