Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq82 91.5 2e-13 >seq82 Length=1542430 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 117080 GGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTC 117139 || || ||| | |||| || |||||||||||| | || |||||||| || ||||| ||| Sbjct 614294 GGAAGCTTCTGCTCCATTTTCTGGCTCAAGAAAAGGGGTCTCATGCCTGGACTGACATTC 614235 Query 117140 AGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 ||||| ||||| ||| ||| || ||||| ||||| ||||||||||| | |||| Sbjct 614234 AGCAATGAGCTGATCAGCAGAGATGAGGGCTTGCATACAGACTTTGCCTGCCTACTGT 614177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213738676480