Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq848 84.2 3e-11 >seq848 Length=8259430 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 || ||||| |||| ||| | ||||| | ||| |||| ||| |||||||| | |||||| Sbjct 8057753 TACCTAGCTGTGTCATTGAAGACTCTGAGCATGGGAACAATGCCATTGGAGTTGCCATTG 8057694 Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63361 |||||| ||| ||||| || ||| | || || |||| || || || || || Sbjct 8057693 GTCCCTCTGATGTAGCTGCCTGTGGATCTGATGTTGTGCATTGCCAGCCCAATCCCGCCA 8057634 Query 63362 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 || | || ||||| |||| || ||| || || ||||||||||||| Sbjct 8057633 GCACTCTTGGAGATACATGCACACTCTTTCAATGTGTCATAGATGCCCT 8057585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625283500800