Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 5e-11 >seq82 Length=1542430 Score = 84.2 bits (92), Expect = 5e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGT-TCTATGATCGGTATGAATGCCGATCTCATGAA 269177 |||||| |||||| ||| || ||| || || | || |||||||| ||||| ||| Sbjct 614102 GAGTTCTGTTGTGAGGCTCTCAG-TGTATCGCTGGTAGGCATGAATGCAGATCTGATGTC 614044 Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 || |||||| | || ||||||||||| | | ||||| || | |||||| |||| Sbjct 614043 ACAGTATATCAACTTTGTGGCTGATCGGTTGCTGGTAGCACTTGGGTGTGAGAAGCTGTA 613984 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 | | | ||||| || | || ||||| | || || ||| |||| ||||| || || Sbjct 613983 CCACACAGCAAATCCTTTTGACTGGATGGAGATGATATCCCTCCAAGGCAAGACCAATTT 613924 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 ||| || || || | |||||||| || ||||||| ||| Sbjct 613923 CTTTGAGCGCCGAGTGGGTGACTATCAGCGCGCTGGTGTCATG 613881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179641583054944