Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq846 87.8 7e-12 seq837 86.0 2e-11 >seq846 Length=7821234 Score = 87.8 bits (96), Expect = 7e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| | || || || || || ||||| || |||| || |||||||| || ||||| Sbjct 3959906 GCAGTCGTGACAGTGCCAGCATACTTCAACGACTCACAGCGCCAAGCAACAAAGGATGCT 3959965 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| ||||||||| | |||| || || || || ||||| || ||||||||||| | Sbjct 3959966 GGAGCCATTGCTGGTCTTGATGTCCTGCGTATCATCAATGAGCCAACAGCAGCTGCCATC 3960025 Query 451442 GCATATGGACT 451452 || |||||||| Sbjct 3960026 GCCTATGGACT 3960036 >seq837 Length=2853963 Score = 86.0 bits (94), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 391139 TCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACT 391198 ||| || ||||| || |||||||||||||| || || || ||||| | || |||||||| Sbjct 1825181 TCAGGACAAGGAGGGTATTCCTCCTGATCAGCAGCGCTTGATTTTTGCTGGCAAACAACT 1825240 Query 391199 TGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 |||||||| ||||| |||| ||||| || || | ||||| | ||| | ||| Sbjct 1825241 AGAAGATGGCAGAACGCTGGCAGATTACAACATACAGAAGGAGTCCACATTGCAC 1825295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975696933819584