Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq238 86.0 8e-12 >seq238 Length=1739233 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/176 (71%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 7970 TTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCC 8029 || ||||| ||| || |||||||| || || |||||||| ||||| || | | | Sbjct 251413 TTAGGGTTGCTGGTTGCCTGGTTCTTGGCGGCATCCCCGATCAGACGCTCCTCCT---CA 251469 Query 8030 GTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACG 8089 || || || ||||||||||| || | || || || |||||||| | ||| || |||||| Sbjct 251470 GTGAAAGCAACGTACGATGGCGTGATGCGGTTGCCCTGGTCGTTTGTAATGATCTCTACG 251529 Query 8090 CGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | | | | | || ||||| || |||||||| || || | |||||| || || Sbjct 251530 TTGCCCTCCTTGTACACCCCGACACAAGAATACGTGGTACCCAGATCAATCCCAAT 251585 Score = 86.0 bits (94), Expect = 8e-12 Identities = 143/202 (71%), Gaps = 10/202 (5%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || |||||||| ||||||||||||| |||||| | | | | || || | | Sbjct 629423 GATACATCAAAGGTACCACCACCCAAGTCAAACACCAAGATGGTCTCATTGC------TC 629370 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 ||||| |||| ||||| || | | || || || || |||||||| ||||| || ||| Sbjct 629369 TTCTTCTCGAAGCCGTAAGCCAAGGAAGCAGCAGTGGGCTCATTAATGATACGCAGCACA 629310 Query 7654 GTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 | |||||||||||| | ||| ||||| || || ||||| || || || || || |||| Sbjct 629309 -TCCAGGCCAGCAAT-GCGGCCAGCATCCTTTGTGGCTTGACGCTGTGAGTCATTGAAGT 629252 Query 7713 AGGCCGGGACCGTTACGACCGC 7734 | || || || || || || || Sbjct 629251 ATGCTGGCACGGTCACCACTGC 629230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635126067592320