Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 4e-11 >seq82 Length=1542430 Score = 84.2 bits (92), Expect = 4e-11 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT- 25928 |||| |||||||| || | ||||||| || || ||||| ||||| || || Sbjct 614345 TTTGCAGAGCGGCTTGTCGGCTTTGCTTGCGTAGAAGGCATTCACTTCAGTGGAAGCTTC 614286 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACG 25987 ||| |||| |||||||||||| | |||||| | |||||| || ||| || ||| | Sbjct 614285 TGCT-CCATTTTCTGGCTCAAGAA-AAGGGGTCTCATGCCTGGACTGACATTCAGCAATG 614228 Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 |||| |||||||| || ||||| | || | ||| ||||||||||| || || Sbjct 614227 AGCTGATCAGCAGAGATGAGGGCTTGCATACAGACTTTGCCTGCCTACTGTA 614176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834954245120