Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq82 87.8 2e-11 >seq82 Length=1542430 Score = 87.8 bits (96), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| | || || || | ||||||| || ||||| || | || || |||||||| | Sbjct 614198 TATGCAAGCCCTCATCTCTGCTGATCAGCTCATTGCTGAATGTCAGTCCAGGCATGAGAC 614257 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | | ||||||||||| || |||| |||||| || || ||| ||||| || ||| Sbjct 614258 CCCTTTTCTTGAGCCAGAAAATGGAGCAGAAGCTTCCACTGAAGTGAATGCCTTCTACGC 614317 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAA 869319 |||||||||| |||||||| ||||| Sbjct 614318 AAGCAAAGCCGACAAGCCGCTCTGCAAA 614345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107069609148816