Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq845 87.8 2e-12 >seq845 Length=2227659 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/129 (77%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCG 24862 ||| || |||||||| || || ||| | |||||||| || || |||||||||||| ||| Sbjct 1814311 AGGTATCCCTCCCGACCAGCAGCGTCTTATCTTTGCTGGAAAGCAGCTGGAGGATGGTCG 1814252 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 | || || | || |||||||| || ||||| || || || || ||||||| || || Sbjct 1814251 -CACACTTG-CTGACTATAACATCCAGAAGGAGTCTACCCTTCATCTGGTGTTACGTCTG 1814194 Query 24923 CGCGGAGGC 24931 ||||||||| Sbjct 1814193 CGCGGAGGC 1814185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892831085440