Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq82 87.8 3e-11 >seq82 Length=1542430 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 ||| || ||||| || ||||| || || ||||||||||| | ||| || |||| |||||| Sbjct 613899 ATAGTCACCCACTCGGCGCTCAAAGAAATTGGTCTTGCCTTGGAGGGATATCATCTCCAT 613958 Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCG 794026 ||| || || || || || |||| ||||||| ||||| || | | |||| || Sbjct 613959 CCAGTCAAAAGGATTTGCTGTGTGGTACAGCTTCTCACACCCAAGTGCTACCAGCAACCG 614018 Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCG 794082 || || || || | || ||||| |||| || | || |||||||| | |||| Sbjct 614019 ATCAGCCACAAAGTTGATATACTGTGACATCAGATCTGCATTCATGCCTACCAGCG 614074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916156194372272