Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq845 82.4 5e-11 >seq845 Length=2227659 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| ||| ||||||||| ||||||||||| | || |||| |||| ||| Sbjct 1814204 ACCAGATGAAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGTGTGCGACCATCCTCC 1814263 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||| || ||||| || || |||||||| Sbjct 1814264 AGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTC 1814298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689433964912