Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq837 87.8 1e-12 >seq837 Length=2853963 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 |||||||| || | ||||| || || || ||||| ||||| || | || | ||| Sbjct 1825304 CAGCACCAGGTGCAATGTGGACTCCTTCTGTATGTTGTAATCTGCCAGCGTTCTGCCATC 1825245 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||||||||||||| | ||||| | |||||||| || ||||||||||| ||||| Sbjct 1825244 TTCTAGTTGTTTGCCAGCAAAAATCAAGCGCTGCTGATCAGGAGGAATACCCTCCTTGTC 1825185 Query 29694 TTG 29696 || Sbjct 1825184 CTG 1825182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215218759568