Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq847 86.0 6e-12 >seq847 Length=8161804 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538 |||| |||||||| | ||||||| | ||| ||||| ||| ||| || || | ||| Sbjct 5657140 CCTCAATGCTGTCACTCTTCATGCAGATCAGGAAGCAAGAGGACAGCTGAGGGCGAGGCG 5657081 Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598 |||| || ||||| || || ||| |||||||| || || || | ||| | || Sbjct 5657080 TGCCCGCATTGAACAGCGTTGGAGAGGCATGTGTAAACCATCGCTCACTGAGCATGTGGT 5657021 Query 149599 ACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAG 149656 ||| | || |||| | || ||||| || ||| ||||||| | || |||||||| Sbjct 5657020 ACGTCAAGATGGCACTC--TCGATGTCTTCCTGATGCATGCCTACTGACACACGCATCAG 5656963 Query 149657 CATATGCTGCGGTCGCTCCGCCACTTTG 149684 ||| ||||| || || ||| | |||||| Sbjct 5656962 CATGTGCTGAGGCCGTTCCACTACTTTG 5656935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415675739520