Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq846 93.3 5e-14 >seq846 Length=7821234 Score = 93.3 bits (102), Expect = 5e-14 Identities = 197/290 (68%), Gaps = 12/290 (4%) Strand=Plus/Minus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509 || ||||||||||| || | || || || ||||||||| || | || ||||| Sbjct 3745267 CGGTCAAAACGACCGGGTCTGAGCAGAGCTGCATCAAGGACGTCAGGCCTGTTGGTGGCT 3745208 Query 11510 GCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 || | || | | ||||| | ||||||||||||||||| || || | || || Sbjct 3745207 GCCAGGACAATGACACCAGTGTTGCCCTCAAAGCCATCCATCTCTGTAAGCAGCTGGTTG 3745148 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTTGCTTGCCCA 11627 || ||||| || ||||||||| |||| || ||| ||||||| | ||| || | Sbjct 3745147 ATGGTTTGCTCCCTCTCATCA-TTGCCACCA-CCCATGCCAGCACCTCTTTGGCGACCAA 3745090 Query 11628 CCGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCA 11683 | |||||||||||||||||||| || || || || || | || || | | || Sbjct 3745089 CAGCATCAATCTCATCAATGAACACGATGCAGGGGGCTTTCTTCTTGGCAGCAG----CA 3745034 Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 ||||| ||| || || || ||||| || ||||||||||| |||| Sbjct 3745033 AAGAGGCTGCGCACTCTGCGGGAGCCCACCCCCACAAACATCTCTTCAAA 3744984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025342860800