Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq837 91.5 4e-13 >seq837 Length=2853963 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || ||||| || ||||| | ||||| || || || | |||||||| |||| ||||| Sbjct 1825309 AGCCTCAGCACCAGGTGCAATGTGGACTCCTTCTGTATGTTGTAATCTGCCAGCGTTCTG 1825250 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||||||||| || || ||||| || || | || || || || || |||||||| ||| Sbjct 1825249 CCATCTTCTAGTTGTTTGCCAGCAAAAATCAAGCGCTGCTGATCAGGAGGAATACCCTCC 1825190 Query 225616 TTGTCTTG 225623 ||||| || Sbjct 1825189 TTGTCCTG 1825182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192518243148512