Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq103 82.4 9e-11 >seq103 Length=24105 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 164021 TTCATCATCGCCTTCATCGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTC 164080 || ||||| || ||||| | |||||||||||||||||| ||||| ||||| || || || Sbjct 21924 TTTATCATTGCGTTCATTGCTGCTCCTCCTGTGGACATTGATGGTATCCGTGAGCCAGTA 21983 Query 164081 GCTGGTTCGCTCATGTATGGAAACAACA 164108 ||||||| || | || |||||||||| Sbjct 21984 TCTGGTTCTCTATTATACGGAAACAACA 22011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557648488863360