Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq847 93.3 1e-13 >seq847 Length=8161804 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| |||||||| ||||| |||||||||||||| ||||| || |||| || || Sbjct 3587139 AGAACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAATGTTCGGCCGTCC 3587198 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || ||||| |||||||| | ||||||||| | | ||| ||| Sbjct 3587199 TCTAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCT 3587249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808263737008