Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq847 91.5 1e-13 seq845 91.5 1e-13 >seq847 Length=8161804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| ||| | | || |||||||| ||| |||||||||||||||||| || Sbjct 3587120 CATGCCTCCTCGCAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTC 3587179 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| | | || |||| || || ||||| ||||||||||| | ||||||||| || | Sbjct 3587180 GGCCAATGTTCGGCCGTCCTCTAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGG 3587239 Query 44227 AGG 44229 ||| Sbjct 3587240 AGG 3587242 >seq845 Length=2227659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | |||||||| ||||| || |||||| |||||||| || || Sbjct 1814182 CATGCCTCCGCGCAGACGTAACACCAGATGAAGGGTAGACTCCTTCTGGATGTTATAGTC 1814241 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| || |||||||| | ||||||||| || | Sbjct 1814242 AGCAAGTGTGCGACCATCCTCCAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCGGG 1814301 Query 44227 AGGCACACCT 44236 ||| | |||| Sbjct 1814302 AGGGATACCT 1814311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986679499216