Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq238 86.0 2e-11 >seq238 Length=1739233 Score = 86.0 bits (94), Expect = 2e-11 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| || || || |||||||| || || ||||| || ||||| ||||| || || || || Sbjct 1332844 AGGTATTCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCAG 1332785 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 |||||| || ||||| || |||| || || ||||||||||| |||| Sbjct 1332784 GACTCTGGCAGATTACAATATCCAGAAGGAGTCAACACTGCA-CTTG 1332739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203718121460512