Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq67 89.7 1e-12 >seq67 Length=277217 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 157268 ACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAAT 157327 ||||| ||||||| ||||||||||| || || ||||| ||||| |||||||| || || Sbjct 72856 ACTCTCCTCTCAAAGAAGTTGGTCTTGCCTTGTAGAGAGATCATCTCCATCCAGTCAAAG 72797 Query 157328 GGGTTGGCGCAGTTGTACACCTTGTCGTACCCC--AGCTGGTTCAGCCAGTAGTCCGCCA 157385 |||||| | ||| | | |||||| |||||| |||| ||| | | ||| |||| Sbjct 72796 GGGTTGCTGGCATTGAAGAGCTTGTCATACCCCAAAGCT--ATCAACAGGCGGTCTGCCA 72739 Query 157386 CAAACTTGATGTACTCTGTCAT--GCTCT 157412 || | ||||||||| || ||| ||||| Sbjct 72738 CATATCTGATGTACTGTGACATCAGCTCT 72710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073757086083136