Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq264 84.2 2e-11 >seq264 Length=364395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || ||||| || |||||||||||||| |||| || | ||| |||| || Sbjct 32642 GTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAGAGTGCGTCCATCCTCCAGCTG 32583 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 |||||| ||| |||| || | || || || || | ||| ||||| || ||| | Sbjct 32582 TTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTT 32523 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 |||||| | ||| ||||| | |||| || | |||||| | ||||| || Sbjct 32522 AGACTTGACATTGTCAATGGTGTCTGAAGACTCGACCTCCAAAGTGATGGTCTTGCCAGT 32463 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || ||||| |||||||| Sbjct 32462 CAAGGTCTTGACAAAGATTTGCAT 32439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379340870056365