Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq264 87.8 2e-12 >seq264 Length=364395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||||| || | ||||| || || || || || |||||||| || Sbjct 31794 GCCACCACGCAGACGCAGCACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 31735 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| || || | || || |||||| |||||||||| ||||| || ||||| Sbjct 31734 CAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 31675 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| ||| || || | | || | ||||| | | || || Sbjct 31674 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCTGAAGACTCAAC 31615 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||||||||| || || || || |||||||| Sbjct 31614 CTCCAAAGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 31567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507010109390640