Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq386 86.0 9e-12 >seq386 Length=203426 Score = 86.0 bits (94), Expect = 9e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97203 CAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAAC 97262 ||||| |||||||| | || ||||| || |||||||| | | || ||||| ||| Sbjct 96721 CAGGTTGAGACTGGCAACCCATACATGCTGTACAAGGACAGCTGCAACCGCAAGTCCAAT 96780 Query 97263 CAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 || | || |||||||||||||| || |||||| ||||| || ||||| |||||| || Sbjct 96781 CAGCAAAACCTGGGCACCATCAAGTGCAGCAATCTCTGCACTGAGATTGTGGAGTACACC 96840 Query 97323 TCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATC 97357 || || || | || || ||| |||||||| Sbjct 96841 AGCCCTGAAGAATCAGCTGTCTGCAACCTGGCATC 96875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052928786520