Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq344 86.0 9e-12 >seq344 Length=164929 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 79712 CAGCAGGGTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAAA 79771 ||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| ||||| Sbjct 70120 CAGCAGGGTGGAGTAGCAGAGGTTGTGGGCCATCATAATGGAGGGGTACAGGGATGCAAA 70179 Query 79772 GTCGAACACGGCCACGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACACCGTGGCGCC 79831 ||| | |||||| || || |||||| ||| || | || | ||| || || || Sbjct 70180 GTCCAGGGTGGCCACCGGCTCCCGGTAGTAGCCCTGCTTTGCGTCCAGCACTGTCGCCCC 70239 Query 79832 CT 79833 || Sbjct 70240 CT 70241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753932819789520