Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq386 91.5 4e-13 >seq386 Length=203426 Score = 91.5 bits (100), Expect = 4e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| ||||||| || | || || ||| ||||||| || ||||||||||||||||| Sbjct 96720 GCAGGTTGAGACTGGCAACCCATACATGCTGTACAAGGACAGCTGCAACCGCAAGTCCAA 96779 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 ||||| |||| || || || || ||||| || || || |||||| | || ||||| Sbjct 96780 TCAGCAAAACCTGGGCACCATCAAGTGCAGCAATCTCTGCACTGAGATTGTGGAGTACAC 96839 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310 | || || || | || || || ||||| || || || || ||||| Sbjct 96840 CAGCCCTGAAGAATCAGCTGTCTGCAACCTGGCATCCATTGCCCTTCC 96887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342294629414