Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq200 105 1e-17 >seq200 Length=180262 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 333319 TGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 333378 |||||||||| ||||| || | ||| || || | |||||| ||| |||| || || | Sbjct 15817 TGTCTTCACCAGAGGCGTATCTCCACGCAATGTAGTCGTTGGGGGTCTTGTCTAGGTGCT 15758 Query 333379 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCC 333438 ||| ||||||||||| |||||||| |||||||| || | | || || || ||||||| Sbjct 15757 GCTCAATGTGGTGGAATGCATGCTGAGCCACGTAGGCCACTCTCAAGTTGGGGTGCTTCC 15698 Query 333439 AAACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTC 333498 | || | || | ||| ||||| | || ||||||| |||||| | ||| || | Sbjct 15697 ACACTGTGCCTTCATTGGTTTCCAGCTCTCCAGTGAGCAGCTTAATCATTGTGGACTTGC 15638 Query 333499 CCGCACCATTT 333509 | || |||||| Sbjct 15637 CAGCTCCATTT 15627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870433549950