Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq350 82.4 9e-11 >seq350 Length=149706 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 12705 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 12764 ||||| || ||||| || || || || | || | || |||| | ||| || || || Sbjct 132456 TCAAAACGTCCTGGTCGCAGCAGAGCAGCATCCAAGACATCAGGTCTGTTGGTGGCAGCC 132397 Query 12765 ATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATG 12824 | |||| || || || | | || ||||||||||| || |||| || || |||||| Sbjct 132396 AGCACAATGACTCCAGTGTTGCCCTCAAAGCCATCCATTTCTGTCAGCAGCTGGTTGATG 132337 Query 12825 GTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGG 12882 || || ||||| |||||||| || || ||| || |||| || || | || || | Sbjct 132336 GTCTGCTCACGCTCATCATT-GCCACCA-CCCATGCCAGCACCACGCTGTCTGCCCACAG 132279 Query 12883 CGTCAATTTCGTCAATGAAAACGATACACGG 12913 | ||||| || |||||||| ||||| || || Sbjct 132278 CATCAATCTCATCAATGAAGACGATGCATGG 132248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502008195320