Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq350 89.7 6e-13 >seq350 Length=149706 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || ||||| ||||| || || |||||| |||| | | ||| | ||| || || || Sbjct 132456 TCAAAACGTCCTGGTCGCAGCAGAGCAGCATCCAAGACATCAGGTCTGTTGGTGGCAGCC 132397 Query 11566 ATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATC 11625 | || | | ||||| | || || || ||||||||||| || ||||||||||| Sbjct 132396 AGCACAATGACTCCAGTGTTGCCCTCAAAGCCATCCATTTCTGTCAGCAGCTGGTTGATG 132337 Query 11626 GTCTGTTCACGCTCATCGTTGGAGGGCATACCACC--TGCC----GAACGCTTCTTACCG 11679 ||||| ||||||||||| ||| |||||| |||| ||||| | || Sbjct 132336 GTCTGCTCACGCTCATCATTG------CCACCACCCATGCCAGCACCACGCTGTCTGCCC 132283 Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||||| ||||||||||| ||||| ||||| || || ||||| |||||| Sbjct 132282 ACAGCATCAATCTCATCAATGAAGACGATGCATGGGGCCTTGGCCTTTGCCTG 132230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971015790600