Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq350 96.9 4e-15 >seq350 Length=149706 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 ||||| || ||||| || || || || |||| | || |||| | || || || || Sbjct 132456 TCAAAACGTCCTGGTCGCAGCAGAGCAGCATCCAAGACATCAGGTCTGTTGGTGGCAGCC 132397 Query 9255 ATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATA 9314 | |||| | || || | ||||| |||||||| ||||||| || ||||| || Sbjct 132396 AGCACAATGACTCCAGTGTTGCCCTCAAAGCCATCCATTTCTGTCAGCAGCTGGTTGATG 132337 Query 9315 GTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGG 9372 || || || || |||||||| || || ||| ||||||| || || | ||||| | Sbjct 132336 GTCTGCTCACGCTCATCATT-GCCACCAC-CCATGCCAGCACCACGCTGTCTGCCCACAG 132279 Query 9373 CATCAATCTCATCAATGAAGACAATACATGG 9403 |||||||||||||||||||||| || ||||| Sbjct 132278 CATCAATCTCATCAATGAAGACGATGCATGG 132248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975807287480