Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq26 590 2e-164 >seq26 Length=15232 Score = 590 bits (654), Expect = 2e-164 Identities = 726/992 (73%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||| |||||||||||||||||| |||||||| || ||||| || ||||| |||| || Sbjct 2219 GCTAAGTCAAGTGGGAAGTTGTGAGCGTTACGTTCGTGCATTACCTCCATACCTAGGTTA 2160 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||| | |||||||||||| || | || | || | || || || ||||| Sbjct 2159 GCACGGTTGATAATGTCAGCCCATGTGTTAATTACACGACCTTGAGAGTCTACAACTGAT 2100 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || || ||||| || ||||| || ||||| |||||||| || | || | ||| |||| | Sbjct 2099 TGGTTAAAGTTGAAACCGTTTAGGTTAAATGCCATAGTTGATATACCTAAAGCAGTAAAC 2040 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||| ||||| | |||||| |||||| || || || || Sbjct 2039 CAGATCCCTACTACTGGCCATGCAGCTAAGAAGAAGTGTAAAGAACGTGAGTTGTTGAAA 1980 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 ||| || ||||| || | | ||||||||| || || || ||||||||||| || || Sbjct 1979 GAAGCGTATTGGAAAATCAAACGCCCAAAGTAACCGTGCGCAGCAACAATGTTGTAAGTT 1920 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||||||||| |||||||| || || | ||| ||||| | ||||||||||||| Sbjct 1919 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCAGATTGGTTCTCAGTTGTTTCACGG 1860 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||| ||||| || | || |||||||||| ||| | || ||||| ||||| Sbjct 1859 ATTAATGATGAAGTTACTAATGAACCATGCATAGCAGAGAAAAGAGAACCACCAAATACA 1800 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 ||||||||||| | ||| ||||| || ||||| | ||| ||||| || || || || ||| Sbjct 1799 CCTGCAACACCTAACATGTGGAAAGGGTGCATTAAGATGTTGTGCTCAGCTTGGAATACA 1740 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 | |||||| || ||||| ||||| ||||| | |||||||| ||| ||| |||||| Sbjct 1739 ATCATAAAGTTAAAAGTACCTGAGATACCTAAGGGCATACCGTCACTAAAAGACCCTTGA 1680 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 || | |||||||| | ||| |||||| || |||||||| || || || ||||||||| Sbjct 1679 CCGATAGGGTAGATAATGAACACAGCAGTAGCAGCTGCAACTGGTGCAGAGTAAGCTACA 1620 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 ||||| || | |||||||| | || ||| ||||||| || |||| ||| Sbjct 1619 GCAATCCAAGGGCGCATACCTAAACGGAAAGAAAGCTCCCATTCACGCCCCATGTAGCAA 1560 Query 36633 GAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCAC 36692 | | ||| | || ||||||| | |||| | ||| || || || ||||| ||||||||| Sbjct 1559 CATACACCTAAGAAAAAGTGGCATACAACTAATTGGTAAGGACCACCGTTGTATAACCAC 1500 Query 36693 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGAT 36752 || || | | || ||||||||||||||||||||||| | ||| ||||| || || | Sbjct 1499 TCATCTAAAGAAGCTGCTTCCCAGATTGGGTAGAAGTGTAAACCAATTGCATTTGAAGTA 1440 Query 36753 GGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 36812 || || | || |||||||| ||||||||||| || | | | || || || |||||| Sbjct 1439 GGAACAACAGCACCAGAGATAATGTTGTTTCCGTACAACAGGGAACCAGACACTGGCTCA 1380 Query 36813 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 36872 |||||||| || || ||||| ||||| || || ||||||||||| | ||| | || | Sbjct 1379 CGAATACCGTCGATGTCCACAGGAGGAGCTGCTACAAATGCAATAATAAACACAGTTGTT 1320 Query 36873 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 36932 || |||||||| | ||||||||||| || |||||||| || | |||| ||||| | Sbjct 1319 GCAGTTAAAAGAGTAGGGATCATTAAAACACCAAACCAACCAATGTAGATACGGTTTTCA 1260 Query 36933 GTACTTGTAACCCAGTCACATAAACTTTCCCA 36964 || || ||||| ||||| || | | |||| Sbjct 1259 GTTGAAGTTACCCACTCACAAAAGCGTGCCCA 1228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150453190440658