Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq47 89.7 4e-13 >seq47 Length=350483 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | ||| | ||| ||||| || || || ||||| || || | ||| ||| |||| Sbjct 106375 AACACAAGATGTAAGGTTGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTCCTGCCATCC 106434 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| ||||| || ||||| || | ||||| ||||| || |||||||||||||| || Sbjct 106435 TCCAACTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCAGGTGGAATGCCTTCTTTGTCC 106494 Query 101378 TG 101379 || Sbjct 106495 TG 106496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275130331689