Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq350 89.7 6e-13 >seq350 Length=149706 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 175468 CCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TG 175525 ||||| || ||||||||||||||||||||||| ||||||| || || | ||||| || Sbjct 132248 CCATGCATCGTCTTCATTGATGAGATTGATGCTGTGGGCAGACAGCGTGGTGCTGGCATG 132307 Query 175526 GTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATG 175585 | || || ||||| ||| | || || || || || || || || || || ||||||| Sbjct 132308 G-GTGGTGGC-AATGATGAGCGTGAGCAGACCATCAACCAGCTGCTGACAGAAATGGATG 132365 Query 175586 GCTTTGACAATGAGACTGG---CATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCC 175642 ||||||| | ||||| ||||||| | || ||||| || | ||| || Sbjct 132366 GCTTTGAGGGCAACACTGGAGTCATTGTG---CTGGCTGCCACCAACAGACCTGATGTCT 132422 Query 175643 TTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGA 175676 | |||| || || || || || || |||||||| Sbjct 132423 TGGATGCTGCTCTGCTGCGACCAGGACGTTTTGA 132456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564551529760