Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13 295 9e-75 seq33 194 2e-44 seq264 179 5e-40 seq152 138 1e-27 seq350 123 3e-23 seq48 118 1e-21 seq118 98.7 1e-15 seq47 91.5 2e-13 >seq13 Length=690608 Score = 295 bits (326), Expect = 9e-75 Identities = 497/714 (70%), Gaps = 8/714 (1%) Strand=Plus/Plus Query 195709 TGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768 ||||||||| || || || |||||||||| ||||| || || ||||| ||||||||| | Sbjct 513092 TGCAGTTGTTACAGTGCCAGCTTACTTCAACGATTCGCAGCGTCAGGCCACAAAGGACTC 513151 Query 195769 TGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAAT 195828 || | || || || | | || | | || ||||| || ||||| || || || || Sbjct 513152 AGCAGTCATCGCTGGCTTGGAGTGCATGCGTATCATCAACGAGCCAACTGCTGCAGCCAT 513211 Query 195829 TGCTTATGGTCTGGACAAGAA---CA-AG--GACGAAGATAAAAATGTATTGATCTTTGA 195882 ||||||||||| || ||||| || || | || || ||||| |||||||||| Sbjct 513212 CGCTTATGGTCTCGATAAGAAGGACACAGCCGTCGGCGAGCGCAATGTTCTGATCTTTGA 513271 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 || |||||||| || || ||||| || | || | || || | || || ||||| || Sbjct 513272 CCTTGGTGGTGGCACCTTCGATGTGTCGTTGCTGACCATCGAGGAGGGCATTTTCGAGGT 513331 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCG 196002 ||| | || |||||||| ||||| | |||||||| || ||||| | || || Sbjct 513332 CAAGTCCACAGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACAGGCTGGTCAA 513391 Query 196003 TCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGC 196062 ||||| || | ||||| || ||||| ||||| || || |||| || ||| | || Sbjct 513392 CCATTTCACTCAGGAGTTTAAGCGCAAGAACAAGAAGGACATCACTGGCAACCCTCGTGC 513451 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 ||| || |||| |||| |||| || ||||| || || ||||| || || | || || Sbjct 513452 TCTGCGAAGGCTCCGGACGTCATGCGAGCGTGCAAAGCGTACTCTGTCCTCCAGCGCACA 513511 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCG 196182 || | ||||| || || | || || || | |||||||| | | |||||| | Sbjct 513512 GACGTCCATCGAGATCGACTCTCTCTTCGAAGGTGTCGACTTCTACAGCAGCATTACCAG 513571 Query 196183 TGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACA 196242 || | || || ||||| ||| || |||| || ||||| ||||| ||||| || | Sbjct 513572 GGCCAGATTCGAGGAGTTGAACATGGACCTGTTCAGAAAGTGCATGGAGCCTGTCGAG-A 513630 Query 196243 AGTACTT-CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 ||| ||| || || || || ||||| ||| | || |||| ||||||| || || | Sbjct 513631 AGTGCTTGCGAGATGCCAAAATGGACAAGAGCACTGTCCATGAGGTTGTCCTAGTTGGTG 513690 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATT 196361 | || ||||||||||| ||| | || ||||||||| |||||||||| || || Sbjct 513691 GCTCCACCCGTATTCCTAAGGTGCAGCAGATGCTTCAGGACTTCTTCAATGGCAAGGAGC 513750 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGG 196415 || |||| | |||||||| ||||| ||||| || |||||||| || || |||| Sbjct 513751 TATGCAAATCTATCAACCCAGATGAGGCAGTAGCATATGGTGCTGCTGTGCAGG 513804 Score = 143 bits (158), Expect = 4e-29 Identities = 179/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 196526 ATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGAT 196585 |||| || ||||| || || || || || ||||| |||||||| ||||| || || || Sbjct 514572 ATTGGCAGAAACACCACCATCCCCACAAAAAAGGAGCAAGTCTTCTCAACTTACTCAGAC 514631 Query 196586 AATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAAC 196645 || || || || || | |||||||| | ||| ||||| || ||| | ||||||| ||| Sbjct 514632 AACCAGCCTGGAGTGCTCATTCAAGTGTTTGAGGGAGAGCGATCCAGGACAAAGGACAAC 514691 Query 196646 CATCTACTTGG--AACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCAC 196703 | || |||| || ||| || || | || |||||| |||||||| | ||||| |||| Sbjct 514692 AA-CTTGTTGGGCAAGTTT-GAGCTGTCTGGCATTCCACCTGCACCCCGTGGTGTGCCAC 514749 Query 196704 AGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACA 196763 |||| ||||| ||| || || || || ||||| || | ||||| |||||||||||| Sbjct 514750 AGATCAATGTCATCTTTGACATTGATGCCAATGGCATCTTGAACGTGTCAGCTGAGGACA 514809 Query 196764 AG 196765 || Sbjct 514810 AG 514811 >seq33 Length=490745 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| ||||| || || ||||| || ||||| ||||| ||| Sbjct 197307 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACAATCACACTGGAGGTGGAGTCATCA 197366 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||||| || ||||| |||||||| || || ||| Sbjct 197367 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 197426 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || |||||||| || |||||||| ||||| || || | |||||||||||| Sbjct 197427 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGGCTGATTACAAC 197486 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| ||||| | || || ||||| Sbjct 197487 ATCCAGAAGGAGTCCACCCTCCACCTGGTTCTTCGTCTGCGTGGTGG 197533 Score = 167 bits (184), Expect = 3e-36 Identities = 178/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || ||||| || || ||||| | || || ||||| ||| Sbjct 195943 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGAAGTGGAGTCATCA 196002 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || ||||| |||||||||| || ||||| || ||||| || || ||| Sbjct 196003 GACACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 196062 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || |||||||| || |||||||| ||||| ||||| | || || |||||| Sbjct 196063 CAGCGGTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTTTGGCAGACTACAAC 196122 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 |||| ||||| || || || || || || || | || || ||||| ||||| Sbjct 196123 ATTCAGAAGGAATCCACCCTCCATCTGGTGCTGCGTCTGCGTGGTGGCATGCAA 196176 Score = 105 bits (116), Expect = 9e-18 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| ||||| ||||| ||||| || ||||||||||| ||||| ||||| | Sbjct 195595 GTATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACTATCACCCTGGAGGTGGAGTCAT 195654 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 | ||||| ||||| ||| | || ||||||||| || |||||||| Sbjct 195655 CTGACACCATCGACAACGTTAAGAGCAAGATTCAGGACAAGGAAGG 195700 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| ||||| || ||||| || | ||||||||||| || |||||||| || ||||| Sbjct 195470 AGGCATCCCACCTGACCAGCAGCGTTTGATTTTTGCTGGCAAGCAGCTTGAGGACGGACG 195529 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 ||| || || || |||||| | || |||||||| || || || || || || | ||||| Sbjct 195530 TACACTTGCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTGGTCCTGCGACTTCG 195589 Query 172083 GGGTGGT 172089 || ||| Sbjct 195590 CGGAGGT 195596 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||||| ||||| ||||||||||| | ||||| ||||| ||| Sbjct 196171 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAAACTATCACGTTGGAGGTGGAGTCATCA 196230 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| || || || | || ||||||| || |||||||| || Sbjct 196231 GACACCATTGACAATGTGAAGTCCAAGATCCAGGATAAGGAGGG 196274 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||| | ||||| || || ||||| || ||||||||||| ||| Sbjct 195241 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCA 195300 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| || || || | || |||||||||| || |||||||| Sbjct 195301 GACACTATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAAGG 195344 >seq264 Length=364395 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | ||||| || || ||||| | ||||| ||||| ||| Sbjct 32439 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCTTCA 32498 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| | |||||||| || ||||| ||||| || || || ||| Sbjct 32499 GACACCATTGACAATGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 32558 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || |||||||| |||||||| || |||||||| || || ||||| |||||| Sbjct 32559 CAGCGTCTGATCTTTGCTGGCAAACAGCTGGAGGATGGACGCACTCTGGCTGACTACAAC 32618 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| ||||| || || || |||||||| | | || || ||||| Sbjct 32619 ATTCAGAAGGAATCCACCCTTCACCTTGTGTTGCGTCTGCGTGGTGG 32665 Score = 172 bits (190), Expect = 7e-38 Identities = 179/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | || || || || ||||| | ||||||||||| ||| Sbjct 31567 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTTTGGAGGTTGAGTCTTCA 31626 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||||| || ||||| ||||| || || || ||| Sbjct 31627 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 31686 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || |||||||| || ||| | || ||||| || ||| | ||||| |||||| Sbjct 31687 CAGCGTCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGGCTGACTACAAC 31746 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || |||||||| || || || || || || | || || ||||| ||||| Sbjct 31747 ATCCAGAAGGAGTCCACCCTTCATCTGGTGCTGCGTCTGCGTGGTGGCATGCAA 31800 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || ||| | || || || || ||||| | ||||| |||| Sbjct 31225 GTGGTATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACTTTGGAGGTGGAGT 31284 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 | |||||||| ||||| ||| | || | ||||||||||| |||||||| Sbjct 31285 CTTCAGACACCATCGACAACGTGAAGTCAAAGATTCAAGACAAGGAAGG 31333 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || || || ||||| || || || |||||||| || ||||| || ||||| || Sbjct 32312 AGGCATCCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCG 32371 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 |||| | ||||| |||||| | || |||||||||||||| || | || || | || || Sbjct 32372 TACCTTGGCTGACTACAACATCCAGAAGGAGTCTACTCTTCATTTGGTCCTTCGTCTGCG 32431 Query 172083 GGGTGG--TGCAA 172093 ||||| ||||| Sbjct 32432 TGGTGGCATGCAA 32444 Score = 96.9 bits (106), Expect = 5e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 198706 TCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTG 198765 |||||| || ||| || ||| |||||| || |||| ||||||||||||| |||| Sbjct 215241 TCTTTG--CAGGCAAAGGAGAATGCACCATGCATTGTCTTTGTTGATGAGATTGATGCTG 215184 Query 198766 TTGGTAAGAAGCGTGGTGGAAC---TACTACACCTGGTAATGATGAGCGTGAGCAGACGA 198822 | ||| || | ||||||| | | ||| || ||||||||||||||||| Sbjct 215183 TGGGT-CGATCC--CGTGGAACTGGTGTTGGCGGTGGCAACGATGAGCGTGAGCAGACAC 215127 Query 198823 TTAACCAGCTTCTCACTGAGATGGATGGTTTTGACAATGAGACTGGTATCGTGGTGATTG 198882 | |||||||| || || ||||||||||| ||||| | ||||| ||| | || |||| Sbjct 215126 TGAACCAGCTGCTGACAGAGATGGATGGCTTTGAGGGCAACACTGGAATCATTGTCATTG 215067 Query 198883 CTGCTACAAATAGGATTGATATCCTAGATGATGCACT 198919 ||||||| || || ||| || || || |||| || Sbjct 215066 CTGCTACCAACAGAGCTGACATTCTGGACAATGCCCT 215030 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| || || || || ||||| ||||| || || ||||| | ||||| |||||| Sbjct 30904 AGCATGCAGATTTTCGTTAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCG 30963 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || ||||| || || ||| |||| ||||||||| ||||||||||| Sbjct 30964 TCCGACACTATTGACAACGTCAAGAGCAAGATTCAGGATAAGGAAGG 31010 >seq152 Length=86443 Score = 138 bits (152), Expect = 1e-27 Identities = 244/356 (69%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGAT 196471 |||||||||||||| |||| | | | || || || || || ||| | ||||| Sbjct 75708 CAGGCTGCTATTCTGACAGGCCAGGGAGACAGCAAGGTTCAGGACCTGCTGTTGCTTGAC 75649 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 |||||||| ||||| ||||| |||| || || ||||| || ||||| | | ||| Sbjct 75648 GTTGCACCTCTATCCATGGGTATTGAGACCGCTGGTGGCGTCATGACCACTCTCATTCCC 75589 Query 196532 AGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAA 196591 || ||||| || || || || |||||||| || ||||| || || || | || || || Sbjct 75588 AGAAACACCACCATCCCAACCAAGAAGGAGCAGGTCTTCTCCACATACGCAGACAACCAG 75529 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 ||||| || || ||||| | ||| ||||| | ||| | | ||||||| | || Sbjct 75528 CCAGGAGTGTTGATCCAAGTGTTTGAGGGAGAGAGGTCCATGACTAGGGATAACAACCTG 75469 Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711 || || | || || || | ||||| || |||| || || || || || || || | | Sbjct 75468 CTGGGCAAGTTTGAGCTGTCAGGGATCCCCCCTGCCCCTAGGGGGGTACCCCAAATCACT 75409 Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGC 196767 || ||| || ||||| || || || || | || || |||| ||||||||||| Sbjct 75408 GTCACCTTTGACATAGATGCCAACGGCATCTTGAATGTGTCAGCAGAGGACAAGGC 75353 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || || || |||||||| || || || || || ||| | ||||||||||| ||||| Sbjct 78577 TGCGTGGGCGTCTGGCAAAACGACCGCGTTGAAATCATCGCCAATGACCAAGGCAACCGC 78518 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 ||||| ||||| ||||| | || ||||| | || || || | || ||||| || || Sbjct 78517 ACAACACCATCTTACGTCGGTTTCACAGACACAGAGCGCCTGATCGGGGATGCAGCTAAG 78458 Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 || ||| |||||||||||| ||| || || || ||||| ||||| || || || ||| Sbjct 78457 AACCAGGTCGCTATGAACCCTCGCAACACAGTGTTCGACGCAAAGCGACTGATCGGCCGC 78398 Query 195512 AAGTT 195516 ||||| Sbjct 78397 AAGTT 78393 >seq350 Length=149706 Score = 123 bits (136), Expect = 3e-23 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 198732 CCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACT 198791 ||||| ||| ||||||||||||||||||| ||||| || | ||||||||| || Sbjct 132248 CCATGCATCGTCTTCATTGATGAGATTGATGCTGTGGGCAGACAGCGTGGTG---CTGGC 132304 Query 198792 ACACCTGGT---AATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGAT 198848 | |||| |||||||||||||||||||| || |||||||| || || || |||||| Sbjct 132305 ATGGGTGGTGGCAATGATGAGCGTGAGCAGACCATCAACCAGCTGCTGACAGAAATGGAT 132364 Query 198849 GGTTTTGACAATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTA 198908 || ||||| | ||||| || | ||| | ||||| || || || |||| || | Sbjct 132365 GGCTTTGAGGGCAACACTGGAGTCATTGTGCTGGCTGCCACCAACAGACCTGATGTCTTG 132424 Query 198909 GATGATGCACTGCTTCGTCCCGGTCGATTCGAC 198941 |||| ||| ||||| || || || || || ||| Sbjct 132425 GATGCTGCTCTGCTGCGACCAGGACGTTTTGAC 132457 >seq48 Length=276317 Score = 118 bits (130), Expect = 1e-21 Identities = 202/290 (70%), Gaps = 5/290 (2%) Strand=Plus/Minus Query 195699 CTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGA 195758 |||| || |||| ||||| || || || || ||||||| ||| | || ||||| || | Sbjct 122491 CTGTCAAGCATGCTGTTGTCACCGTCCCAGCATACTTCAATGACGCTCAGCGACAAGCCA 122432 Query 195759 CAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACA 195817 | || ||||||| || ||||| ||||| | | || | ||||||||||| |||||| Sbjct 122431 CCAAAGACGCTGGTGTCATTGCTGGTCTCA-CAGTGGAGCGTATTATCAATGAGCCAACA 122373 Query 195818 GCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATC 195877 || || || ||||| || ||||| |||||| |||| | || | || | ||| | Sbjct 122372 GCAGCAGCCATTGCCTACGGTCTTGACAAG---AAGGGTGGCGAGCACAACATCTTGGTG 122316 Query 195878 TTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTC 195937 ||||| | ||||||||||| |||||||| || | || | ||||| || | || Sbjct 122315 TTTGACTTGGGTGGTGGTACCTTTGATGTGTCCATCCTGACCATTGACAACGGCGTGTTT 122256 Query 195938 GAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || | | || ||||| || || || | || |||||||| || || Sbjct 122255 GAGGTCGTGTCCACAGCTGGAGACACCCACTTGGGCGGTGAAGACTTTGA 122206 >seq118 Length=380107 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| |||||||| || || || ||||| | ||||| ||||| ||| Sbjct 348926 ATGCAGATCTTTGTGAAGACCCTTACGGGCAAGACCATCACTTTGGAGGTCGAGTCATCA 348867 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || ||||| |||||| ||||| ||||| || Sbjct 348866 GACACCATCGACAATGTCAAAAGCAAGATCCAAGACAAGGAGGG 348823 >seq47 Length=350483 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 171952 CAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTT 172011 || || || |||||||||||||| |||||||| || || || |||||||| || ||| | Sbjct 106496 CAGGACAAAGAAGGCATTCCACCTGATCAGCAGCGCCTCATCTTTGCTGGCAAGCAGTTG 106437 Query 172012 GAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTT 172071 || ||||| | || | || || |||||| |||| ||||| || || |||| ||||| Sbjct 106436 GAGGATGGCAGGACTTTGGCAGACTACAACATTCAGAAGGAATCAACCTTACATCTTGTG 106377 Query 172072 CTAAGGCT 172079 | ||||| Sbjct 106376 TTGAGGCT 106369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657856832839440