Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq399 98.7 3e-15 >seq399 Length=356141 Score = 98.7 bits (108), Expect = 3e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 252547 TAATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTG 252606 || || || |||||||| || | |||||||| ||||||||| ||| || || |||||| Sbjct 162978 TAGTTGGTCACATACATTCCCATGGCCTGCTTGCCCATAGCAGACTGATACGTGTTTCTG 163037 Query 252607 GGAGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACA-ACACCGAAGATAGTGCT 252665 || ||||| |||| || |||||||||||| || || ||| || || ||||| || Sbjct 163038 GGCGACTGGTTGTGGTCAGGGAAAGGAATGATAGACGC-ACAGACCCCAAAGATCATGGC 163096 Query 252666 TGGGTGAATTTCACAGTG 252683 ||| || ||||||||||| Sbjct 163097 TGGATGGATTTCACAGTG 163114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471804833362149