Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq264 86.0 5e-12 >seq264 Length=364395 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| || || || ||||| ||||| || | || ||| || Sbjct 32439 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCTTCA 32498 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||| ||||| || ||| | || || || Sbjct 32499 GACACCATTGACAATGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 32558 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || |||||||||||||||| | || |||| || |||||| Sbjct 32559 CAGCGTCTGATCTTTGCTGGCAAACAGCTGGAGGATGGACGCACTCTGGCTGACTACAAC 32618 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || | ||| | ||||| | ||||| || || Sbjct 32619 ATTCAGAAGGAATCCACCCTTCACCTTGTGTTGCGTCTGCGTGGTGG 32665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838193669761