Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq67 96.9 8e-15 >seq67 Length=277217 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 131870 TTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGC--TTTCTGTGCTATCTTTTGGCTTA 131927 ||||||||||| ||||| || | ||||| || |||||| | ||||| ||||||| Sbjct 72441 TTTGCTTGTGTGGAAGG--AATCCACTTCAGCGGCAGTTTCTGCTCCATCTTCTGGCTTA 72498 Query 131928 AGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAG 131987 ||||||| ||||||||||| || ||| |||| |||| | || ||| || ||||||| Sbjct 72499 AGAAGCGAGGATTGATGCCAGGTCTCACATTCAGCAATGAGTTGATCAGCAGGGATGAAG 72558 Query 131988 CATTGCATACTGAATTTGC 132006 |||||||| || ||||| Sbjct 72559 GCTTGCATACAGACTTTGC 72577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186802505511597