Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq33 89.7 3e-13 >seq33 Length=490745 Score = 89.7 bits (98), Expect = 3e-13 Identities = 169/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 33508 CAAATAAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTT 33565 |||||| |||| || ||||| | || ||| | |||| || || ||| ||| || | Sbjct 197550 CAAATATAATCTACAAGCCACCACGCAGACGAAGAACCAGGTGGAGGGTGGACTCCTTCT 197491 Query 33566 GTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAAC 33625 | ||||||||||| | | ||||| | || || | || || || ||||| |||| || Sbjct 197490 GGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGAC 197431 Query 33626 GCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACG 33684 ||||||| || | || | || || ||||| ||| || | | |||| ||| | | Sbjct 197430 GCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTT-GGACTTGACATTGTCAATG 197372 Query 33685 GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATC 33744 ||||| ||| ||||| || | ||||| || || || || | || || ||||||||| Sbjct 197371 GTGTCTGATGACTCCACCTCCAGTGTGATTGTCTTGCCAGTCAGGGTCTTGACAAAGATC 197312 Query 33745 TGCAT 33749 ||||| Sbjct 197311 TGCAT 197307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701287883840