Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq386 91.5 1e-13 >seq386 Length=203426 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTC 147518 ||| || || ||||| |||||||| || | ||||| | | | |||||| ||| || || Sbjct 96882 GGCAATGGATGCCAGGTTGCAGACAGCTGATTCTTCAGGGCTGGTGTACTCCACAATCTC 96823 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||| || |||||||| || ||| |||| |||||||||||| || || ||||| Sbjct 96822 AGTGCAGAGATTGCTGCACTTGATGGTGCCCAGGTTTTGCTGATTGGACTTGCGGTTGCA 96763 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGC 147621 ||| ||| | |||||||| || ||| ||||| || ||| Sbjct 96762 GCTGTCCTTGTACAGCATGTATGGGTTGCCAGTCTCAACCTGC 96720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607166677720